Journal of Environmental Treatment Techniques
2020, Volume 8, Issue 2, Pages: 744-749
organic load, the variety of wastewater microorganisms, the
amount of discharged antibiotics, conditions of hospitals,
consumption patterns of antibiotics and the economic and
cultural situation of a society. In Iran, the consumption of
antibiotics has not become standardized in therapeutic settings
and the society. Iran is among countries with the highest
antibiotic consumption. Antibiotic resistance has been reported
in almost all clinical, agricultural, and animal husbandry studies
and against all antibiotic groups (12-16). Limited research has
been conducted on antibiotic resistance in the Iranian
environment (17). In this research, two antibiotic groups, i.e.
sulfonamides (STX) and erythromycins (ER), were
investigated because of their wide application in therapeutic,
agricultural, and animal husbandry environments, as well as
their informal use by the people. The common coding genes
2.3 Quantitate PCR
Plasmid DNA was used as the standard control in real-time
PCR (qPCR). Fresh PCR products of ermB and sul1 were
separated and excised from the agarose gel. The gel fragments
were purified with a gel extraction kit (Gel purification kit, Cat
NO: K-3035-1, Bioneer, USA) and ligated into the PTZ 57R
vector. DNA was transformed into Escherichia coli Top 10
2
using CaCl and heat-shock. Clones containing the correct
insert were confirmed by PCR amplification with m13
universal primer [F-m13 (5-ttgtaaaacgacggccagt-3) and R-m13
(5-acaggaaacagctatgaccatg-3)] and sequencing (14). Plasmids
were purified and plasmid concentration was then determined
®
by spectroscopy (Nano drop ND1000). The copy number of
each plasmid was calculated using the molecular weight of
nucleic acid and length (in base pairs) of the cloned plasmid.
To generate the standard curve, the threshold cycle (Ct) value
was used for each concentration. The qPCR was used to
quantify the concentrations of ermB and sul1 genes. Prior work
had shown that ermB and sul1 genes were present in substantial
concentrations in wastewater. The qPCR was carried out on the
applied bio systems (Applied Bio systems, USA) using the
SYBER green method. All qPCR reactions were performed in
(
Sul1, ErmB) in relation to these two antibiotic groups were
also studied quantitatively.
2
Materials and Methods
1
.2 Sampling and enumeration of antibiotic resistant bacteria
Samples were collected from wastewater treatment plants
in Isfahan province, Iran. Four sampling sites were selected to
study antibiotic-resistant bacteria (ARB) and antibiotic
2
0 µL of reaction mixture (23). T-tests were run to compare
quantity averages in influents and effluents. McNamara
statistical test was used to compare the examination results
from just before and after the WWTPs. ANOVA was employed
to compare the variation results from different sites. Finally,
Pearson’s correlation coefficients were used to determine the
correlations between HPC (heterotrophic plate count),
incidence of ARB, and ARG genes (SPSS 16 for Windows,
SPSS Inc., Chicago, IL).
1 2
resistant genes (ARGs). The first (MW ), second (MW ), and
third (MW ) sampling sites were the influent and effluent of
3
municipal WWTPs with different processes, conventional
activated sludge (two-step), conventional activated sludge, and
stabilization pond, respectively. The capacity of these WWTPs
4
4
4
3 -1
were 25×10 , 13×10 and 9×10 m d , respectively. The
disinfection process of all WWTPs were chlorination. The
1
fourth sampling site (HW ) was the influent and effluent of
extended aeration supported with high-speed sand filter. Its
3
-1
capacity was 890 m d , and its disinfection process was
chlorination. To determine ARB concentration, samples were
3 3 Results and Discussion
3.1 ARB and ARGs in wastewater sources
The average concentrations of ARB and ARGs in influent
diluted and 0.1 mL of each dilution was spread on R
amended individually with erythromycin (15µg mL ),
2
A (Difco),
-1
6
7
and effluent were obtained to be 5.39×10 -4.22×10 and
-
1
9
9
sulfamethoxazole (50 µg mL ), and additional antifungal
nystatin (18, 19). Plates were incubated for 48h at 37˚C. ARB
results were derived by comparing heterotrophic and ARB
cultivable concentrations (20, 21). All assays were performed
in duplicate. Positive samples were rechecked.
1.38×10 -9.29×10 Copies/100 mL, respectively (Fig 1, 2 and
3). Results in all of figures were shown by standard deviation.
Raw wastewater
Final effluent
1.00E+08
.00E+06
1.00E+04
1
2
.2 DNA extraction and qualified PCR
DNA was extracted from original samples. Fifty mL of the
original samples was prepared (centrifuged at 6000 rpm for 15
min) and the pellet was resuspended in 300 µL of distilled
water. The pellets were frozen in liquid nitrogen and boiling
water for three times (22). The DNA was extracted and purified
by DNA extraction kit (promega wizard genomic DNA
purification kit, Madison, WI) according to the manufacturer’s
manual. Primer pairs were used to amplify sul1 and ermB
genes, as taken from Munir et al (19). The total volume of the
reaction mixture (25µL) contained 0.5 µL of each primer, 1.5
1
.00E+02
.00E+00
1
HPC
ARB
HPC
ARB
Municipal
Hospital
Sites
Figure 1: Compare of raw and effluent in municipal and hospital
wastewater
µL MgCl
2
, 0.5 mM dNTP, 2.5 µL PCR buffer, 1 µL of template
These values are larger than the means of ARGs and ARB
achieved in other studies (19, 24, 25). This can be due to
insufficient management of WWTPs in Iran and the nature of
the produced wastewater. The generated wastewater in Iran has
a larger organic load compared with Western countries because
of different nutritional patterns. For example, Kim et al (2006a)
reported a strong relationship between organic load and the
ARB growth rate. Previous studies have reported a high organic
load in the studied urban WWTPs in Isfahan province, Iran
(26). In addition, high quantitative values of resistant genes in
wastewater can be due to high population and horizontal gene
transfer (19, 27).
DNA and 5 units of Taq DNA polymerase (22). All PCR assays
contained a positive and a negative control. PCR amplification
was performed using a thermal cycler (Corbett, Australia). The
PCR profile included initial denaturation at 94˚C for 10 min,
denaturation at 94 ˚C for 45 s, annealing (varied) for 30 s, and
extension at 72˚C for 45s for 30 cycles, followed by a final
extension at 72˚C for 10 min. PCR products (6 µL) were mixed
with 2 µL of DNA safe stain and loaded on 1.5% agarose gel.
Gels were viewed on a UV trans illuminator, and DNA
fragment sizes were compared with the 100-bp ladder (14).
7
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